usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): 10.0381818181818 4.22454545454546 -12.3736363636364
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 996
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 758
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 741
Number of spheres polar: 298, nonpolar: 297, out of current total: 741
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.04363 19.99693 -5.03577 13.45100 -22.36991 -2.53276
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 409
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 356
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 351
Spheres center of coords (x y z): 9.60142048433049 4.45292452991453 -14.0717967806268
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 8.07244358952945
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 17
Final number of spheres that are from crystallographic ligand: 11