usefragsph not on
There are 50 ligand heavy atoms
Ligand center of coords (x y z): 33.02798 23.54806 10.83106
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2114
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1333
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1331
Number of spheres polar: 404, nonpolar: 731, out of current total: 1331
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 23.05542 43.02027 13.59224 33.48858 0.83950 20.71826
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 641
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 525
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 506
Spheres center of coords (x y z): 34.7119899802371 24.7217895256917 10.754353458498
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.89149525019546
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 40
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 50