usefragsph not on
There are 50 ligand heavy atoms
Ligand center of coords (x y z): 33.13002 23.38748 10.74826
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2042
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1277
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1272
Number of spheres polar: 411, nonpolar: 682, out of current total: 1272
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 23.14881 43.12205 13.41300 33.38115 0.75249 20.60661
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 623
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 512
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 494
Spheres center of coords (x y z): 34.9876988461538 24.6891914574899 11.0415950607288
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.84761088482143
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 43
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 50