usefragsph not on
There are 18 ligand heavy atoms
Ligand center of coords (x y z): 6.69161111111111 -3.33855555555556 0.0891111111111111
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 714
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 422
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 422
Number of spheres polar: 154, nonpolar: 219, out of current total: 422
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.29945 16.69026 -13.29673 2.62800 -9.77851 9.41379
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 205
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 162
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 136
Spheres center of coords (x y z): 10.9559027205882 -4.89697786764706 -0.708423897058823
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.24237294484709
Final number of output spheres is: 60
Number of polar spheres: 29
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 18