There are 19 ligand heavy atoms Ligand center of coords (x y z): 41.6684736842105 20.4932105263158 49.98 useligsph not on Starting number of spheres from sph/sph cluster 0: 537 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 379 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 379 Number of spheres polar: 139, nonpolar: 182, out of current total: 379 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.86691 53.62985 8.59617 29.89410 41.35508 61.89508 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 127 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 101 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 41.6684736842105 20.4932105263158 49.98 Center point: 2 xyz: 41.46515 20.14702 50.62725 After continuity checking, number of spheres is: 83 Final number of output spheres is: 83 Number of polar spheres: 21 Number of nonpolar spheres: 42 Number of spheres that are near neither polar nor nonpolar receptor atoms: 20 Final number of spheres that are from crystallographic ligand: 0