usefragsph not on
There are 18 ligand heavy atoms
Ligand center of coords (x y z): 4.52844444444444 19.2925555555556 37.047
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 635
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 351
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 351
Number of spheres polar: 110, nonpolar: 180, out of current total: 351
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.53592 14.03644 9.39799 24.31660 28.14228 46.93694
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 179
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 160
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 153
Spheres center of coords (x y z): 6.03514607843137 15.274377124183 39.9555626143791
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.76891078201898
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 18