usefragsph not on
There are 19 ligand heavy atoms
Ligand center of coords (x y z): 56.4517368421053 56.3593684210526 19.8989473684211
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 955
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 580
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 580
Number of spheres polar: 221, nonpolar: 301, out of current total: 580
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 46.49986 60.44188 46.36862 66.35303 9.94793 29.88391
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 279
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 222
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 180
Spheres center of coords (x y z): 52.7495062777778 59.3726685555555 18.0679209444445
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.51292455283693
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 19