usefragsph not on
There are 37 ligand heavy atoms
Ligand center of coords (x y z): 48.4885945945946 52.6183783783784 19.260027027027
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1291
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 819
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 819
Number of spheres polar: 182, nonpolar: 564, out of current total: 819
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 38.58971 54.14449 42.68872 62.61837 10.30442 29.24448
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 392
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 330
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 322
Spheres center of coords (x y z): 46.6746555279503 52.5192000310559 17.1827964285714
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.08712655220028
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 43
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 37