Distance from surface specified: 1.80 There are 24 ligand heavy atoms Ligand center of coords (x y z): 50.2124166666667 55.9698333333333 20.03275 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 10570 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 8919 WARNING: removing a crystallographic sphere that is distance 1.8966225243838 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 8631 Number of spheres polar: 4707, nonpolar: 3363, out of current total: 8631 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 36.22460 63.66780 41.97560 69.95900 6.06040 32.95400 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 899 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 534 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 496 Spheres center of coords (x y z): 45.0699947580645 55.568731048387 15.3101717741935 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 10.351289624045 Final number of output spheres is: 200 Number of polar spheres: 83 Number of nonpolar spheres: 111 Number of spheres that are near neither polar nor nonpolar receptor atoms: 6 Final number of spheres that are from crystallographic ligand: 23