usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): -5.08626923076923 12.6227692307692 113.713307692308
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1354
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 681
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 668
Number of spheres polar: 196, nonpolar: 286, out of current total: 668
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.05191 4.90580 2.62973 22.62201 103.72187 123.70989
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 390
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 329
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 301
Spheres center of coords (x y z): -7.14690328903654 14.1809287707641 114.333778006645
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.94520059678649
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 26