usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 6.37368965517241 5.14641379310345 24.6976896551724
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1243
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 789
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 784
Number of spheres polar: 159, nonpolar: 350, out of current total: 784
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.60372 16.20270 -4.20819 15.12520 14.75753 34.62562
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 464
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 425
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 398
Spheres center of coords (x y z): 6.92907138190955 5.32244163316583 23.687343040201
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.1785784459542
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 17
Final number of spheres that are from crystallographic ligand: 29