usefragsph not on
There are 32 ligand heavy atoms
Ligand center of coords (x y z): 46.99378125 29.67940625 41.131875
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1514
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 900
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 898
Number of spheres polar: 184, nonpolar: 408, out of current total: 898
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 37.02249 56.64292 19.75822 39.57408 31.23178 50.87293
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 523
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 471
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 447
Spheres center of coords (x y z): 47.3203768232663 28.6256723713646 39.804135033557
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.21877619025786
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 32