There are 20 ligand heavy atoms
Ligand center of coords (x y z): 44.14045 28.9284 2.5836
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 13586
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 8515
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 8515
Number of spheres polar: 4518, nonpolar: 3047, out of current total: 8515
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.14440 56.13820 16.92840 40.90520 -9.41480 14.56600
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1105
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 678
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 664
Spheres center of coords (x y z): 44.5663695783132 29.0933253012048 -0.49480873493976
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 10.4919142672132
Final number of output spheres is: 120
Number of polar spheres: 79
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 20