Distance from surface specified: 1.80 There are 21 ligand heavy atoms Ligand center of coords (x y z): 8.76380952380952 20.6243333333333 22.5917619047619 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 16155 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 12817 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 12350 Number of spheres polar: 5630, nonpolar: 5825, out of current total: 12350 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.23040 22.76340 6.63440 34.62380 8.60160 36.56580 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1360 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 693 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 651 Spheres center of coords (x y z): 5.43969984639018 22.3435413210445 21.3237456221198 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 12.4042890644946 Final number of output spheres is: 200 Number of polar spheres: 120 Number of nonpolar spheres: 75 Number of spheres that are near neither polar nor nonpolar receptor atoms: 5 Final number of spheres that are from crystallographic ligand: 21