There are 20 ligand heavy atoms
Ligand center of coords (x y z): 2.2488 4.68495 51.3982
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 16713
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 10311
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 10311
Number of spheres polar: 5296, nonpolar: 4081, out of current total: 10311
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.74160 14.23620 -7.31400 16.65740 39.40020 63.39800
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1408
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 504
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 340
Spheres center of coords (x y z): 5.63207588235294 7.90641235294117 57.3877405882353
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 9.37653941532661
Final number of output spheres is: 120
Number of polar spheres: 65
Number of nonpolar spheres: 51
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 20