usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 43.5238214285714 31.784 111.067642857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1850
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 854
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 854
Number of spheres polar: 292, nonpolar: 447, out of current total: 854
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 33.55078 52.84952 21.83348 41.74686 101.19586 121.06351
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 433
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 374
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 334
Spheres center of coords (x y z): 41.3465945209581 29.2828496706587 110.789603023952
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.99578081831955
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 28