usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 43.4141666666667 31.947625 111.094875
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1594
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 804
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 804
Number of spheres polar: 318, nonpolar: 374, out of current total: 804
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 33.42747 53.40266 21.94764 41.90085 101.12477 120.62527
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 404
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 341
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 312
Spheres center of coords (x y z): 41.8188970833334 28.2645206410257 111.451592596154
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.94797105677867
Final number of output spheres is: 60
Number of polar spheres: 26
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 24