There are 31 ligand heavy atoms Ligand center of coords (x y z): 22.5083548387097 -18.8072903225806 8.45432258064516 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 15822 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9343 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9343 Number of spheres polar: 6074, nonpolar: 2572, out of current total: 9343 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 10.55300 34.50340 -30.80320 -6.80940 -3.49200 20.44780 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1301 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 456 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 436 Spheres center of coords (x y z): 22.1521577981651 -24.4787389908257 9.82809633027522 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 9.01147626308594 Final number of output spheres is: 120 Number of polar spheres: 74 Number of nonpolar spheres: 42 Number of spheres that are near neither polar nor nonpolar receptor atoms: 4 Final number of spheres that are from crystallographic ligand: 31