usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -31.705 6.07265 -47.73025
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 799
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 482
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 479
Number of spheres polar: 142, nonpolar: 235, out of current total: 479
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -41.65400 -22.01205 -2.49962 15.55993 -57.70409 -37.76266
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 168
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 140
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 125
Spheres center of coords (x y z): -34.6477964 4.77166208 -50.10339928
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.65878906640727
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 20