usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 16.7266666666667 -5.98242857142857 14.191
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 963
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 408
WARNING: removing a crystallographic sphere that is distance 0.575630089554047 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 0.764287903868692 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 1.11471162190048 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 404
Number of spheres polar: 98, nonpolar: 225, out of current total: 404
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.76745 26.67209 -15.74748 3.74400 4.52955 23.95217
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 229
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 198
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 171
Spheres center of coords (x y z): 18.8561111695906 -10.1518928654971 15.0739060818714
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.64444539253067
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 42
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 18