usefragsph not on
There are 16 ligand heavy atoms
Ligand center of coords (x y z): 17.4521875 24.4988125 61.03175
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 992
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 530
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 521
Number of spheres polar: 119, nonpolar: 277, out of current total: 521
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.78371 27.42476 14.51095 34.47353 51.27908 71.02518
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 293
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 252
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 232
Spheres center of coords (x y z): 18.985702112069 21.3288887931034 60.1323735775862
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.10249016590228
Final number of output spheres is: 60
Number of polar spheres: 8
Number of nonpolar spheres: 45
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 16