usefragsph not on
There are 13 ligand heavy atoms
Ligand center of coords (x y z): 16.7605384615385 25.2158461538461 62.3419230769231
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 708
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 461
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 455
Number of spheres polar: 118, nonpolar: 215, out of current total: 455
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.85722 26.70029 15.38667 35.21024 52.38031 72.24276
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 267
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 230
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 201
Spheres center of coords (x y z): 18.9343958208955 21.5718512437811 61.2234208457712
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.10530515753462
Final number of output spheres is: 60
Number of polar spheres: 10
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 13