usefragsph not on
There are 13 ligand heavy atoms
Ligand center of coords (x y z): 16.8248461538462 25.1956153846154 62.4206153846154
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 894
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 589
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 584
Number of spheres polar: 154, nonpolar: 294, out of current total: 584
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.84348 26.72589 15.35905 35.14977 52.45175 72.08630
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 300
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 249
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 222
Spheres center of coords (x y z): 19.064499009009 21.8657716666667 60.9413210810811
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.11368200914066
Final number of output spheres is: 60
Number of polar spheres: 8
Number of nonpolar spheres: 48
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 13