usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 16.645625 -7.8365 16.6647083333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1098
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 683
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 681
Number of spheres polar: 172, nonpolar: 369, out of current total: 681
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.65309 26.54818 -17.80806 2.15219 6.80052 26.61018
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 374
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 319
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 299
Spheres center of coords (x y z): 18.3585306354515 -11.6003254180602 16.2570619732441
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.09567478386059
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 44
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 24