usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 16.87565 -5.5713 14.1091
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1046
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 443
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 443
Number of spheres polar: 114, nonpolar: 245, out of current total: 443
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.97736 26.80387 -15.54127 4.38052 4.11663 23.91710
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 171
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 138
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 84
Spheres center of coords (x y z): 16.8863739285714 -9.72648440476191 15.8187636904762
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.02704948663016
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 20