usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): 17.2706666666667 25.0046666666667 62.3453333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 811
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 503
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 494
Number of spheres polar: 125, nonpolar: 240, out of current total: 494
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.31532 27.17491 15.01334 34.99206 52.36555 72.14553
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 269
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 228
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 204
Spheres center of coords (x y z): 19.6660973529412 21.7737368627451 60.7913657843137
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.30101492376756
Final number of output spheres is: 60
Number of polar spheres: 9
Number of nonpolar spheres: 45
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 12