usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 17.3193103448276 9.72027586206896 -11.4873448275862
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1177
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 599
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 597
Number of spheres polar: 121, nonpolar: 397, out of current total: 597
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.34069 27.29405 -0.01200 18.29131 -21.45580 -3.55199
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 306
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 259
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 243
Spheres center of coords (x y z): 20.5234309876543 8.20466962962963 -13.2416404938272
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.60461346639455
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 45
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 29