X+ Y- Z+ Y- Z- Y+ X+ Y+ Z+ Z- X- Y+ X- Y- Z- Y+ Z- Z- After creating box around spheres, box is too small (705099.409728032 < 1500000), so increasing its size Center of receptor atoms is (x y z): -12.172909733777 9.51980158069883 -20.1254355241265 Center of current box is (x y z): 18.001875 9.41826 12.1385 Diagonals of current box are (D1: x y z, D2: x y z): -33.14675 -5.51309 -26.574 -2.857 24.34961 2.297 D2X+ D1Y- D2Y+ D1Z- D2Z+ **Total grid points in box is now: 830996.375680982 **BOX SIZE is now: 31.28975 31.8627 30.871 Center of current box is (x y z): 17.501875 9.41826 12.1385 Diagonals of current box are (D1: x y z, D2: x y z): -33.14675 -6.51309 -27.574 -1.857 25.34961 3.297 D2X+ D1Y- D2Y+ D1Z- D2Z+ **Total grid points in box is now: 970427.167233932 **BOX SIZE is now: 32.28975 33.8627 32.871 Center of current box is (x y z): 17.001875 9.41826 12.1385 Diagonals of current box are (D1: x y z, D2: x y z): -33.14675 -7.51309 -28.574 -0.856999999999999 26.34961 4.297 D2X+ D1Y- D2Y+ D1Z- D2Z+ **Total grid points in box is now: 1124039.78438688 **BOX SIZE is now: 33.28975 35.8627 34.871 Center of current box is (x y z): 16.501875 9.41826 12.1385 Diagonals of current box are (D1: x y z, D2: x y z): -33.14675 -8.51309 -29.574 0.143000000000001 27.34961 5.297 D2X+ D1Y- D2Y+ D1Z- D2Z+ **Total grid points in box is now: 1292482.22713983 **BOX SIZE is now: 34.28975 37.8627 36.871 Center of current box is (x y z): 16.001875 9.41826 12.1385 Diagonals of current box are (D1: x y z, D2: x y z): -33.14675 -9.51309 -30.574 1.143 28.34961 6.297 D2X+ D1Y- D2Y+ D1Z- D2Z+ **Total grid points in box is now: 1476402.49549278 **BOX SIZE is now: 35.28975 39.8627 38.871 Center of current box is (x y z): 15.501875 9.41826 12.1385 Diagonals of current box are (D1: x y z, D2: x y z): -33.14675 -10.51309 -31.574 2.143 29.34961 7.297 D2X+ D1Y- D2Y+ D1Z- D2Z+ **Total grid points in box is now: 1676448.58944573 **BOX SIZE is now: 36.28975 41.8627 40.871 Center of receptor atoms is (x y z): -12.172909733777 9.51980158069883 -20.1254355241265 Center of current box is (x y z): -15.001875 9.41826 -12.1385 Diagonals of current box is (D1: x y z, D2: x y z): -33.14675 -11.51309 -32.574 3.143 30.34961 8.297 Limit diagonals to 8.3f : -33.147 -11.513 -32.574 3.143 30.350 8.297