usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): -17.78468 9.36868 -11.84248
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1207
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 558
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 553
Number of spheres polar: 102, nonpolar: 358, out of current total: 553
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -27.72028 -7.80196 -0.62452 19.33896 -18.86106 -1.92050
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 180
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 153
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 143
Spheres center of coords (x y z): -21.7302477622378 9.7989886013986 -10.2483125174825
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.21543334206702
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 25