usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 16.3993448275862 -6.25731034482759 14.1489655172414
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1212
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 612
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 612
Number of spheres polar: 115, nonpolar: 383, out of current total: 612
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.47845 26.37208 -16.24587 3.72787 4.58118 23.95070
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 296
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 260
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 242
Spheres center of coords (x y z): 18.9468612809917 -9.41881714876033 13.693555661157
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.08966677275309
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 46
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 29