usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): -17.68192 9.3972 -11.91196
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1233
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 579
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 575
Number of spheres polar: 127, nonpolar: 327, out of current total: 575
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -27.53403 -7.70223 0.22709 19.37912 -19.28231 -2.40397
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 295
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 262
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 243
Spheres center of coords (x y z): -21.4339993827161 10.780382345679 -10.0520299588477
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.79417698920767
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 45
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 25