usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 17.83956 9.984 -11.40288
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1144
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 607
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 607
Number of spheres polar: 104, nonpolar: 387, out of current total: 607
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.15975 27.75775 0.08527 18.29490 -21.32709 -3.43849
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 303
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 267
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 257
Spheres center of coords (x y z): 21.4504074319066 7.87707007782101 -13.0916068871595
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.19026111973742
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 47
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 25