usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 16.7384 -7.74495 16.6926
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 796
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 478
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 474
Number of spheres polar: 117, nonpolar: 253, out of current total: 474
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.63460 26.72105 -17.60133 1.82596 6.84502 26.59444
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 270
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 234
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 224
Spheres center of coords (x y z): 18.7950525 -9.86577375 14.4215930803571
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.1349486891976
Final number of output spheres is: 60
Number of polar spheres: 10
Number of nonpolar spheres: 45
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 20