There are 25 ligand heavy atoms Ligand center of coords (x y z): -8.8938 3.12232 6.02436 useligsph not on Starting number of spheres from sph/sph cluster 0: 1069 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 682 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 676 Number of spheres polar: 172, nonpolar: 382, out of current total: 676 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -20.73586 2.35474 -8.65101 15.07761 -5.95692 17.88879 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 234 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 186 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -8.8938 3.12232 6.02436 Center point: 40 xyz: -8.71600 3.24611 6.08020 After continuity checking, number of spheres is: 160 Spheres center of coords (x y z): -10.3315695625 2.9620878125 10.68992675 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -0.922902464065709 0.29137303216974 -0.124545859000685 Average weighted-distance for final elimination is: 31.002508198152 Final number of output spheres is: 120 Number of polar spheres: 30 Number of nonpolar spheres: 65 Number of spheres that are near neither polar nor nonpolar receptor atoms: 25 Final number of spheres that are from crystallographic ligand: 0