usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 17.1976551724138 9.30772413793104 -12.2050344827586
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1254
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 644
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 644
Number of spheres polar: 155, nonpolar: 390, out of current total: 644
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.24823 27.09319 -0.60694 18.23393 -22.10059 -2.94400
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 316
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 275
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 261
Spheres center of coords (x y z): 21.085585210728 7.99161413793104 -13.1602588888889
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.90718825688595
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 29