usefragsph not on
There are 22 ligand heavy atoms
Ligand center of coords (x y z): 6.16104545454545 13.2107272727273 18.5561818181818
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1213
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 779
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 779
Number of spheres polar: 258, nonpolar: 269, out of current total: 779
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.82020 16.12189 3.24084 23.14554 8.96971 28.54385
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 440
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 379
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 350
Spheres center of coords (x y z): 5.72664617142858 15.7660341142857 17.8803315142857
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.70392946789171
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 22