ID reso RMSD_A RMSD_B Mutant Author Journal year lig_ID covalen smiles ligand_name 1C3B 2.25 0.344 0.236 no Powers ProteinSci. 1999 BZB yes B(c1cc2ccccc2s1)(O)O BENZO(B)THIOPHENE-2-BORONIC ACID (BZB) 1FCM 2.46 0.438 0.279 Q120L/Y150E Patera JACS 2000 CXN yes Cc1c(c(no1)c2ccccc2Cl)C(=O)N[C@H]3[C@@H]4N(C3=O)[C@H](C(S4)(C)C)C(=O)O CLOXACILLIN 1FCN 2.35 0.402 0.222 Q120L/Y150E Patera JACS 2000 LOR yes c1ccc(cc1)[C@H](C(=O)N[C@H]2[C@H]3CCC(=C(N3C2=O)C(=O)O)Cl)N LORACABEF 1FCO 2.20 0.435 0.178 Q120L/Y150E Patera JACS 2000 MOX yes CC1=C(N2[C@@H]([C@@](C2=O)(NC(=O)[C@H](c3ccc(cc3)O)C(=O)O)OC)OC1)C(=O)O MOXALACTAM DERIVATIVE 1FSW 1.90 0.324 0.202 no Caselli Chem.Biol. 2001 CTB yes B(CNC(=O)Cc1cccs1)(O)O N-2-THIOPHEN-2-YL-ACETAMIDE BORONIC ACID 1FSY 1.75 0.305 0.210 no Caselli Chem.Biol. 2001 1O5 yes B(CNC(=O)c1c(onc1c2ccccc2Cl)C)(O)O CLOXACILLIN DERIVATIVE BORONIC ACID 1GA9 2.10 0.337 0.269 no Tondi Chem.Biol. 2001 ETB yes B(c1cccc(c1)NS(=O)(=O)c2cc(cs2)S(=O)(=O)c3ccccc3)(O)O 3-(4-BENZENESULFONYL-THIOPHENE-2-SULFONY LAMINO)- PHENYLBORONIC ACID 1I5Q 1.83 0.475 0.217 N152A Trehan Biochemistry 2001 MOX yes CC1=C(N2[C@@H]([C@@](C2=O)(NC(=O)[C@H](c3ccc(cc3)O)C(=O)O)OC)OC1)C(=O)O MOXALACTAM DERIVATIVE 1IEL 2.00 0.432 0.157 no Powers Biochemistry 2001 CAZ yes CC(C)(C(=O)O)O/N=C(/c1csc(n1)N)\C(=O)N[C@H](C=O)[C@@H]2N=C(C(=C)CS2)C(=O)O ACYLATED CEFTAZIDIME 1IEM 2.30 0.322 0.218 no Powers Biochemistry 2001 CB4 yes B(CNC(=O)C(=NOC(C)(C)C(=O)O)c1csc(n1)N)(O)O PINACOL-[.]-METHANEBORONATE 1KDS 2.15 0.332 0.208 no Powers J.Med.Chem. 2002 NPB yes B(c1cccc(c1)[N+](=O)[O-])(O)O 3-NITROPHENYLBORONIC ACID 1KDW 2.28 0.353 0.178 no Powers J.Med.Chem. 2002 4CB yes B(c1ccc(cc1)C(=O)O)(O)O 4-CARBOXYPHENYLBORONIC ACID 1KE0 2.30 0.340 0.161 no Powers J.Med.Chem. 2002 CVB yes B(c1ccc(cc1)\C=C\C(=O)O)(O)O 4-(CARBOXYVIN-2-YL)PHENYLBORONIC ACID 1KE3 2.15 0.335 0.198 no Powers J.Med.Chem. 2002 BDB yes B(c1ccc(cc1)c2ccc(cc2)B(O)O)(O)O 4,4'-BIPHENYLDIBORONIC ACID 1KE4 1.72 0.407 0.000 no Powers J.Med.Chem. 2002 apo no [O-]P(=O)([O-])[O-] PHOSPHATE ION 1KVL 1.53 0.452 0.152 S64G Beadle Structure 2002 THN no C=C1CSC(=NC1C(=O)O)[C@@H](C(=O)O)NC(=O)Cc2cccs2 HYDROLYZED CEPHALOTHIN 1KVM 2.06 0.356 0.165 no Beadle Structure 2002 CEO yes C=C1CS[C@@H](N=C1C(=O)O)[C@@H](C=O)NC(=O)Cc2cccs2 HYDROLYZED CEPHALOTHIN 1L0D 1.53 0.422 0.101 S64D Beadle J.Mol.Biol. 2002 apo no [O-]P(=O)([O-])[O-] PHOSPHATE ION 1L0E 1.90 0.556 0.142 K67Q Beadle J.Mol.Biol. 2002 apo no [O-]P(=O)([O-])[O-] PHOSPHATE ION 1L0F 1.66 0.441 0.139 N152H Beadle J.Mol.Biol. 2002 apo no [O-]P(=O)([O-])[O-] PHOSPHATE ION 1L0G 1.50 0.505 0.108 S64G Beadle J.Mol.Biol. 2002 apo no [O-]P(=O)([O-])[O-] PHOSPHATE ION 1L2S 1.94 0.270 0.160 no Powers Structure 2002 STC no c1cc(ccc1NS(=O)(=O)c2ccsc2C(=O)O)Cl 3-[(4-CHLOROANILINO)SULFONYL]THIOPHENE-2 -CARBOXYLIC ACID 1LL5 1.80 0.346 0.131 no Beadle AAChemotheapy 2002 IM2 yes C[C@H]([C@@H](C=O)[C@H]1CC(=C(N1)C(=O)O)SCCNC=N)O IMIPENEM; N-FORMIMIDOYL-THIENAMYCINE 1LL9 1.87 0.305 0.129 no Trehan Chem.Biol. 2002 AXL yes CC1([C@@H](N[C@H](S1)[C@@H](C=O)NC(=O)[C@@H](c2ccc(cc2)O)N)C(=O)O)C AMOXICILLIN ACYL ADDUKT 1LLB 1.72 0.306 0.114 no Trehan Chem.Biol. 2002 PCN yes CC1([C@@H](N[C@H](S1)[C@@H](C=O)NC(=O)/C(=N\OC)/c2csc(n2)N)C(=O)O)C ATMO PENICILLIN ACYL ADDUKT 1MXO 1.83 0.324 0.170 no Morandi J.Am.Chem.Soc. 2003 SM2 yes B([C@H](c1cccc(c1)C(=O)O)NC(=O)Cc2cccs2)(O)O (1R)-1-(2-THIENYLACETYLAMINO)-1-(3-CARBO XYPHENYL)METHYLBORONIC ACID 1MY8 1.72 0.289 0.105 no Morandi J.Am.Chem.Soc. 2003 SM3 yes B([C@H](c1ccccc1)NC(=O)Cc2cccs2)(O)O (1R)-1-(2-THIENYLACETYLAMINO)-1-PHENYLME THYLBORONIC ACID 1XGI 1.96 0.301 0.125 no Tondi J.Am.Chem.Soc. 2005 NST no c1cc(cc(c1)[N+](=O)[O-])NS(=O)(=O)c2ccsc2C(=O)O 3-{[(3-NITROANILINE]SULFONYL}THIOPHENE-2-CARBOXYLIC ACID 1XGJ 1.97 0.359 0.153 no Tondi J.Am.Chem.Soc. 2005 HTC no c1cc(c(cc1C(=O)O)O)NS(=O)(=O)c2ccsc2C(=O)O 3-{[(4-CARBOXY-2-HYDROXYANILINE]SULFONYL}THIOPHENE-2 CARBOXYLIC ACID 2BLS 2.00 0.326 0.287 no Usher Biochemistry 1998 apo no 2FFY 1.07 0.540 0.179 N289A Chen J.Am.Chem.Soc. 2006 SM3 yes B([C@H](c1ccccc1)NC(=O)Cc2cccs2)(O)O (1R)-1-(2-THIENYLACETYLAMINO)-1-PHENYLME THYLBORONIC ACID 2HDQ 2.10 0.512 0.261 no Babao Nat.Chem.Biol. 2006 C21 no c1cc(sc1)C(=O)O THIOPHENE-2-CARBOXYLIC ACID 2HDR 2.20 0.441 0.264 no Babao Nat.Chem.Biol. 2006 4A3 no c1cc(c(cc1C(=O)O)O)N 4-AMINO-3-HYDROXYBENZOIC ACID 2HDS 1.16 0.481 0.212 no Babao Nat.Chem.Biol. 2006 4MB no CS(=O)(=O)Nc1ccc(cc1)C(=O)O 4-[(METHYLSULFONYL)AMINO]BENZOIC ACID 2HDU 1.49 0.391 0.167 no Babao Nat.Chem.Biol. 2006 F12 no CC(=O)Nc1c(ccs1)C(=O)O 2-(ACETYLAMINO)THIOPHENE-3-CARBOXYLIC ACID 2I72 2.20 0.157 0.300 no Ventur J.Med.Chem. 2007 VA1 yes B(c1cc2cc(ccc2s1)CN(C=O)C=O)(O)O {5-[(DIFORMYLAMINO)METHYL]-1-BENZOTHIEN-2-YL}BORONIC ACID 2P9V 1.80 0.493 0.120 no Wyrem J.Am.Chem.Soc. 2007 KCX yes OC=O LYSINE NZ-CARBOXYLIC ACID (parent: LYS)(type: lPeptideLinking) 2PU2 1.86 0.318 0.139 no Babao J.Med.Chem. 2008 DK2 no c1cc(ccc1C[C@H](C(=O)O)N2C(=O)c3ccc(cc3C2=O)C(=O)O)O 2-[---]- 1,3-DIOXOISOINDOLINE-5-CARBOXYLIC ACID 2R9W 1.80 0.286 0.184 no Babao J.Med.Chem. 2008 23C no c1ccc2c(c1)cccc2C[C@H](C(=O)O)N3C(=O)c4ccc(cc4C3=O)C(=O)O 2-[-]- 1,3-dioxo-2,3-dihydro-1H-isoindole-5-car boxylic acid 2R9X 1.90 0.280 0.212 no Babao J.Med.Chem. 2008 WH6 no c1ccc2c(c1)cccc2C[C@H](CC(=O)O)N3C(=O)c4ccc(cc4C3=O)C(=O)O 2-[-1H-isoindole-5-carboxylic acid 2RCX 2.00 0.310 0.137 no Morandi Bioorg.Med.Chem 2008 SM4 yes B([C@H](c1cccc(c1)\C=C\C(=O)O)NC(=O)Cc2cccs2)(O)O (1R)-1-(---)-1-(3-(2-CARBOXYVINYL)-PHENYL) METHYLBORONIC ACID 3BLS 2.30 0.325 0.299 no Usher Biochemistry 1998 APB yes B(c1cccc(c1)N)(O)O M-AMINOPHENYLBORONIC ACID 3BM6 2.10 0.322 0.184 no Tondi unpublished 2222 C9P yes B(c1ccc(c(c1)NS(=O)(=O)c2cc(cs2)S(=O)(=O)c3ccccc3)C(=O)O)(O)O 4-(dihydroxyboranyl)-2-({[---]sulfonyl}amino)benzoic acid 3GQZ 1.80 0.482 0.225 no Teotico Proc.Natl.Acad. 2009 GF7 no CC(=O)c1ccc(cc1)N2C[C@H](CC2=O)C(=O)O (3S)-1-(4-acetylphenyl)-5-oxopyrrolidine-3-carboxylic acid 3GR2 1.80 0.422 0.132 no Teotico Proc.Natl.Acad. 2009 GF4 no CCC1=C(NN(C1=O)c2[nH]nnn2)C 4-ethyl-5-methyl-2-(1H-tetrazol-5-yl)-1,2-dihydro-3H-pyrazol-3-one 3GRJ 2.49 0.389 0.183 no Teotico Proc.Natl.Acad. 2009 GF14 no c1ccc(cc1)c2[nH]cc(n2)C(=O)O 2-phenyl-1H-imidazole-4-carboxylic acid 3GSG 2.10 0.487 0.216 no Teotico Proc.Natl.Acad. 2009 GF1 no C[C@@H](C(=O)O)N1C(=O)[C@H]2[C@H]3CC[C@H](C3)[C@H]2C1=O (2S)-2-[---)-1,3-dioxooctahydro-2H-4,7-methanoisoindol-2-yl]propanoic acid 3GTC 1.90 0.298 0.203 no Teotico Proc.Natl.Acad. 2009 GTC no C1CC[C@H]([C@H](C1)C2=NNC(=S)N2)C(=O)O (1R,2S)-2-(---)cyclohexanecarboxylic acid 3GV9 1.80 0.361 0.252 no Teotico Proc.Natl.Acad. 2009 GV9 no CC(=O)Nc1ccsc1C(=O)O 3-(acetylamino)thiophene-2-carboxylic acid 3GVB 1.80 0.520 0.172 no Teotico Proc.Natl.Acad. 2009 3GV no c1ccc(c(c1)N2C[C@H](CC2=O)C(=O)O)O (3S)-1-(2-hydroxyphenyl)-5-oxopyrrolidin e- 3-carboxylic acid