Creating binding-site residue list Creating molecular surface real 0m3.019s user 0m0.443s sys 0m0.515s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0: 830 spheres. 339. 339. 339. 340. 340. 340. 340. 340. 340. 340. 340. 340. 340. 340. 340. 632. 632. 633. 678. 678. 678. 678. 678. 678. 678. 678. 678. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 689. 689. 690. 690. 691. 691. 691. 691. 691. 691. 691. 691. 691. 693. 693. 694. 694. 694. 694. 694. 694. 694. 694. 694. 694. 914. 916. 916. 916. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 919. 924. 924. 927. 928. 928. 933. 933. 933. 933. 933. 933. 933. 933. 933. 933. 934. 934. 934. 934. 934. 934. 934. 934. 935. 935. 935. 935. 935. 935. 935. 935. 935. 936. 936. 936. 936. 936. 936. 937. 937. 937. 937. 937. 937. 937. 937. 937. 937. 937. 937. 937. 937. 937. 937. 937. 938. 938. 939. 939. 939. 939. 939. 939. 939. 939. 939. 939. 939. 945. 945. 945. 945. 945. 945. 945. 945. 949. 950. 950. 950. 950. 950. 950. 951. 951. 951. 951. 951. 951. 952. 952. 953. 953. 953. 953. 953. 953. 953.1656.1656.1656.1656.1657.1657.1657.1657.1657.1657.1657.1657.1659.1659.1659.1660.1660.1660.1660.1660.1660.1660.1660.1660.1660.1660.1660.1660.1660.1677.1677.1677.1677.1677.1677.1677.1677.1677.1677.1677.1678.1680.1697.1738.1738.1738.1739.1739.1739.1851.1851.1852.1852.1852.1853.1853.1853.1853.1853.1853.1853.1853.1853.1853.1853.1853.1853.1853.1854.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1857.1859.1859.1859.1859.1859.1859.1859.1860.1860.1860.1860.1860.1860.1860.1860.1860.1861.1861.1861.1861.1862.1862.1862.1862.1862.1863.1863.1870.1870.1870.1870.1870.1870.1870.1870.1872.1872.1872.1872.1873.1873.1873.1873.1873.1873.1874.1875.1875.1875.1875.1875.1875.1875.1875.1875.1875.1875.1875.1875.1875.1875.1875.1876.1876.1876.1876.1876.1876.1876.1877.1877.1877.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1878.1879.1879.1879.1879.1879.1879.1879.1879.1879.1880.1880.1880.1884.1884.1884.1884.1884.1884.1884.1884.1884.1887.1887.1887.1887.1888.1888.1888.1888.1888.1889.1889.1889.1889.1891.1892.1892.1892.1892.1892.1892.1892.1893.1893.1893.1893.1893.1893.1893.1893.1893.1893.1893.1893.1893.1893.1893.1893.1897.1897.1897.1898.1898.1898.1898.1898.1898.1898.1898.1898.1898.1900.1901.1901.1901.1901.1901.1901.1901.1901.1902.1903.1903.1905.1905.1905.1906.1906.1906.1906.1906.1906.1906.1906.1906.1906.1906.1906.1906.1906.1907.1910.1910.1910.1911.1911.1911.1911.1911.1913.1916.1916.1917.1917.1917.1917.1917.1917.1917.1917.1917.1917.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1918.1921.1921.1921.1922.1922.1922.1922.1922.1922.1922.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2057.2058.2060.2060.2060.2060.2061.2061.2068.2068.2068.2072.2072.2072.2072.2072.2072.2072.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2076.2077.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2080.2081.2081.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2082.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2083.2115.2115.2115.2115.2115.2116.2116.2116.2116.2118.2118.2118.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2119.2265.2265.2267.2267.2267.2267.2268.2268.2268.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2269.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2283.2283.2283.2283.2283.2286.2286.2286.2286.2286.2286.2287.2287.2287.2287.2289.2289.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2296.2296.2296.2296.2296.2296.2296.2296.2296.2301.2301.2301.2302.2315.2317.2317.2318.2319.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 23m2.707s user 23m2.215s sys 0m0.184s Heavy solvent excluded grid being made FORTRAN STOP real 32m37.863s user 32m37.276s sys 0m0.232s