usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 0.26652380952381 31.2349523809524 4.47042857142857
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 933
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 292
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 292
Number of spheres polar: 100, nonpolar: 169, out of current total: 292
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.60818 8.52129 21.25965 41.13753 -4.47879 14.34391
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 143
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 125
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 84
Spheres center of coords (x y z): 0.187478095238095 31.5789354761905 4.65250559523809
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.72783296281692
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 21