There are 27 ligand heavy atoms Ligand center of coords (x y z): 0.586888888888889 31.5 4.55203703703704 useligsph not on Starting number of spheres from sph/sph cluster 0: 1075 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 633 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 633 Number of spheres polar: 288, nonpolar: 283, out of current total: 633 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.37578 11.36548 19.50770 43.49533 -7.13388 16.53142 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 251 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 156 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 0.586888888888889 31.5 4.55203703703704 Center point: 61 xyz: 0.81641 30.65741 5.21511 After continuity checking, number of spheres is: 50 Final number of output spheres is: 50 Number of polar spheres: 16 Number of nonpolar spheres: 27 Number of spheres that are near neither polar nor nonpolar receptor atoms: 7 Final number of spheres that are from crystallographic ligand: 0