usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 0.586888888888889 31.5 4.55203703703704
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1075
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 326
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 326
Number of spheres polar: 97, nonpolar: 187, out of current total: 326
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.33527 10.50099 21.51795 41.42515 -5.40989 13.88234
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 115
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 89
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 61
Spheres center of coords (x y z): 0.459682295081967 31.7727724590164 4.84645491803279
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.79534673719673
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 27