There are 21 ligand heavy atoms Ligand center of coords (x y z): 27.6678095238095 2.499 4.10461904761905 useligsph not on Starting number of spheres from sph/sph cluster 0: 933 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 584 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 584 Number of spheres polar: 250, nonpolar: 273, out of current total: 584 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.67930 39.63930 -9.49208 14.49141 -7.75909 15.97792 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 219 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 141 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 27.6678095238095 2.499 4.10461904761905 Center point: 59 xyz: 27.64668 2.69268 4.23117 After continuity checking, number of spheres is: 50 Final number of output spheres is: 50 Number of polar spheres: 16 Number of nonpolar spheres: 29 Number of spheres that are near neither polar nor nonpolar receptor atoms: 5 Final number of spheres that are from crystallographic ligand: 0