There are 21 ligand heavy atoms Ligand center of coords (x y z): 27.1989047619048 2.16042857142857 4.05833333333333 useligsph not on Starting number of spheres from sph/sph cluster 0: 909 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 539 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 538 Number of spheres polar: 261, nonpolar: 234, out of current total: 538 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.29938 39.17222 -9.80612 14.07635 -7.53862 16.05097 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 186 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 128 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 27.1989047619048 2.16042857142857 4.05833333333333 Center point: 23 xyz: 26.77528 1.32800 3.86344 After continuity checking, number of spheres is: 44 Final number of output spheres is: 44 Number of polar spheres: 14 Number of nonpolar spheres: 24 Number of spheres that are near neither polar nor nonpolar receptor atoms: 6 Final number of spheres that are from crystallographic ligand: 0