There are 21 ligand heavy atoms Ligand center of coords (x y z): 26.7668571428571 2.3387619047619 4.63190476190476 useligsph not on Starting number of spheres from sph/sph cluster 0: 1145 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 680 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 678 Number of spheres polar: 354, nonpolar: 262, out of current total: 678 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 14.81571 38.76136 -9.64574 14.31891 -7.34804 16.59134 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 231 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 146 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 26.7668571428571 2.3387619047619 4.63190476190476 Center point: 52 xyz: 26.83637 2.50837 4.72180 After continuity checking, number of spheres is: 80 Final number of output spheres is: 80 Number of polar spheres: 31 Number of nonpolar spheres: 42 Number of spheres that are near neither polar nor nonpolar receptor atoms: 7 Final number of spheres that are from crystallographic ligand: 0