usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 27.2002608695652 2.07691304347826 4.34086956521739
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1347
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 355
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 355
Number of spheres polar: 122, nonpolar: 199, out of current total: 355
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 18.39003 37.07260 -7.87671 12.06005 -5.62869 14.32816
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 181
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 145
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 117
Spheres center of coords (x y z): 26.3554056410256 3.97222641025641 5.64522358974359
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.56371370618065
Final number of output spheres is: 60
Number of polar spheres: 18
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 23