There are 21 ligand heavy atoms Ligand center of coords (x y z): 27.5011428571429 35.4234285714286 4.30876190476191 useligsph not on Starting number of spheres from sph/sph cluster 0: 1189 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 649 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 647 Number of spheres polar: 266, nonpolar: 264, out of current total: 647 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.50860 39.49035 23.46115 47.41875 -7.58054 16.27756 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 230 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 148 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 27.5011428571429 35.4234285714286 4.30876190476191 Center point: 66 xyz: 27.37024 35.44624 4.59946 After continuity checking, number of spheres is: 86 Final number of output spheres is: 86 Number of polar spheres: 29 Number of nonpolar spheres: 41 Number of spheres that are near neither polar nor nonpolar receptor atoms: 16 Final number of spheres that are from crystallographic ligand: 0