usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 27.5011428571429 35.4234285714286 4.30876190476191
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1189
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 363
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 363
Number of spheres polar: 102, nonpolar: 177, out of current total: 363
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.64909 37.43347 28.31063 45.30797 -5.46383 14.29978
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 110
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 80
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 67
Spheres center of coords (x y z): 26.8547225373134 36.6402311940299 5.43682462686567
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.40090252890428
Final number of output spheres is: 45
Number of polar spheres: 8
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 21