There are 21 ligand heavy atoms Ligand center of coords (x y z): 27.009 2.47861904761905 4.25280952380952 useligsph not on Starting number of spheres from sph/sph cluster 0: 861 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 556 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 556 Number of spheres polar: 253, nonpolar: 255, out of current total: 556 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.02809 39.00136 -9.51465 14.47597 -7.69246 16.20027 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 214 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 139 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 27.009 2.47861904761905 4.25280952380952 Center point: 49 xyz: 27.03679 2.65679 4.31996 After continuity checking, number of spheres is: 49 Final number of output spheres is: 49 Number of polar spheres: 13 Number of nonpolar spheres: 29 Number of spheres that are near neither polar nor nonpolar receptor atoms: 7 Final number of spheres that are from crystallographic ligand: 0