There are 29 ligand heavy atoms Ligand center of coords (x y z): 27.6808965517241 2.4968275862069 5.80344827586207 useligsph not on Starting number of spheres from sph/sph cluster 0: 1172 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 740 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 738 Number of spheres polar: 233, nonpolar: 451, out of current total: 738 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 18.29932 39.60069 -9.49413 14.49312 -5.63561 17.74930 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 242 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 174 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 27.6808965517241 2.4968275862069 5.80344827586207 Center point: 81 xyz: 27.99347 2.14656 5.69501 After continuity checking, number of spheres is: 63 Final number of output spheres is: 63 Number of polar spheres: 17 Number of nonpolar spheres: 40 Number of spheres that are near neither polar nor nonpolar receptor atoms: 6 Final number of spheres that are from crystallographic ligand: 0