There are 21 ligand heavy atoms Ligand center of coords (x y z): 26.7668571428571 2.3387619047619 4.63190476190476 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1010 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 557 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 557 Number of spheres polar: 225, nonpolar: 273, out of current total: 557 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.74648 38.67703 -9.65185 14.33272 -7.33397 16.02581 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 189 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 139 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 26.7668571428571 2.3387619047619 4.63190476190476 Center point: 19 xyz: 27.18225 2.55000 4.91804 After continuity checking, number of spheres is: 49 Final number of output spheres is: 49 Number of polar spheres: 12 Number of nonpolar spheres: 29 Number of spheres that are near neither polar nor nonpolar receptor atoms: 8 Final number of spheres that are from crystallographic ligand: 0